lskatz

lskatz

Member Since 14 years ago

CDC (work) + personal projects, Atlanta, GA

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550 contributions in the last year

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⚡ :deciduous_tree: Create a tree using Mash distances
⚡ :dancer: :palm_tree: LYVE-SET, a method of using hqSNPs to create a phylogeny, especially for outbreak investigations
⚡ :feet: QA/QC pipeline for a MiSeq/HiSeq/Ion Torrent/assembly-only run
⚡ :construction_worker: Fasten toolkit, for streaming operations on fastq files
⚡ :octopus: A curated database of completed assemblies with taxonomy IDs
⚡ :pencil: Sketch-based surveillance platform